CSN:

Common Substring Network

Unsupervised Approach for Inferring Biological Networks based on the Genome Alone

Welcome to the CSN generator homepage.

Here we provide a unique tool that based on a list of gene sequences, and without any additional information, creates a substring similarity-based genetic network.

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What CSN provides

Generate Common Substring Network

Connecting the genes by repetitive substrings similarity.

Plot the CSN graph

Plot the new graph automatically for less than 100 genes. Also, create a file you can upload to the Cytoscape tool for bigger networks.

Start analysing your data

Gives initial analysis: hubs, outliers, etc.