next up previous
Next: Tips for FastA Results Up: The FastA Software Package Previous: Which Program When?

   
FastA Output

The output of FASTA contains information about all the hits (the score, the statistics of the score, the alignment itself, general information about the hit, Smith-Waterman score about the query and the hit). At [20] and at [16] the output also contains a graph of frequency of expected and observed scores. Running FASTA through SRS, enables the user to choose the output format. This is very recommended because it is exactly the details which biologists interested in.

Itshack Pe`er
1999-01-17