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Gene Networks
14 February 11, 2000 Ron Shamir Igor Bogudlov and Vladimir Koushnir
Gene Networks
Preface
Examples
Functional Analysis
Tools
Gene Network Models
Boolean Network Model
Expression Matrix
Identification of Gene Regulatory Networks by Gene Disruptions and Overexpressions
Preface
Model description and definitions
Upper and Lower Bounds on the Number of Experiments
Bounded In-degree Case With Bounded Cost
More Efficient Strategies for Special Cases
Heuristic Strategy for the Practical Case
Related Problems: Consistency and Stability of Networks
Interactive Inference and Experimental Design
The Predictor
The Chooser
Evaluation of the Technique
Predictor Evaluation
Chooser Evaluation
Lower Bound Comparison
Bibliography
About this document ...
Peer Itsik
2001-03-04
