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Current members

Assaf Gottlieb (Post-doctoral researcher, joint with Eytan Ruppin)	Yael Silberberg (PhD, joint with Martin Kupiec) (MSc 2011)
Nir Atias (PhD) (MSc, 2009)
Arnon Mazza (PhD)	Dima Blokh (MSc)
Dana Silverbush (MSc)	Shay Houri (MSc)

Past members

Eitan Hirsh (MSc, 2007):

Identification of conserved protein complexes based on a model of protein network evolution

Oved Ourfali (MSc, 2007):

SPINE: a framework for signaling-regulatory pathway inference from cause-effect experiments

Guy Geva (MSc, 2008):

Identification of protein complexes from co-immunoprecipitation data

Maxim Kalaev (MSc, 2008):

Algorithms and tools for the alignment of multiple protein networks

Tomer Shlomi (PhD, 2008):

Functional models and building blocks of metabolic and protein networks

Shaul Karni (MSc, 2009):

A network-based method for predicting disease causing genes

Liron Levkovitz (MSc, 2009):

Identification of enriched transcription factor binding sites in the promoters of co-expressed genes

Sasha Medvedovsky (MSc, 2009):

An algorithm for orienting graphs based on cause-effect pairs and its applications to orienting protein networks

Sharon Bruckner (MSc, 2009):

Topology free querying of protein interaction networks

Oron Vanunu (MSc, 2009):

Associating genes and protein complexes with disease via network propagation

Nir Yosef (PhD, 2009):

Functional models of cellular response to perturbation

Tal Peleg (MSc, 2010):

Network-free inference of knockout effects in yeast

Inbar Cohen-Gihon (PhD, 2010):

Domain-based evolution of protein networks

Tomer Benyamini (MSc, 2010):

Computational metabolic modeling of cellular growth

Misael Mongiovi (Post-Doc, 2010):

Methods for network alignment and querying

Liat Perlman (MSc, 2010):

Combining drug and gene similarity metrics for drug-target elucidation

Shiri Freilich (Post-Doc, 2011):

Modeling bacterial communities

Liram Vardi (MSc, 2011):

A linearized constraint based approach for modeling signaling networks

Oded Magger (MSc, 2011):

Enhancing the prioritization of disease causing genes through tissue-specific

protein-protein interaction networks.