Michal Ozery-Flato's Home Page

Michal Ozery-Flato
School of Computer Science,
Tel Aviv University, Tel Aviv, 69978 ISRAEL
Lab: +972-3-640-5394
Fax: +972-3-640-9357
email: ozery@post.tau.ac.il

Ph.D. student in Computer Science
Adviser: Prof. Ron Shamir.


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My research is in the area of genome rearrangements.

Publications

Journals:

M. Ozery-Flato, C. Linhart, L. Trakhtenbrot, S. Izraeli, and R. Shamir “Large-scale analysis of chromosomal aberrations in cancer karyotypes reveals two distinct paths to aneuploidy”, Genome Biology, Vol. 12 No. 6 (2011), R61. [PDF]
M. Ozery-Flato and R. Shamir “An algorithm for sorting by reciprocal translocations”, Journal of Discrete Algorithms, (2011) In press. [PDF]
M. Ozery-Flato and R. Shamir “Sorting Cancer Karyotypes by Elementary Operations”, Journal of Computational Biology, Vol. 16 No. 10 (2009), 1445--1460. [PDF]
M. Ozery-Flato and R. Shamir “Sorting Genomes with Centromeres by Translocations”, Journal of Computational Biology, Vol. 15 No. 7 (2008), 1-20. [PDF]
M. Ozery-Flato and R. Shamir “Sorting by Reciprocal Translocations via Reversals Theory”, Journal of Computational Biology, Vol. 14 No. 4 (2007), 408-422. [PDF]
M. Ozery-Flato and R. Shamir “Two notes on genome rearragnements”, Journal of Bioinformatics and Computational Biology, 1 (2003), 71-94. [PDF]
A.S. Fraenkel and M. Ozery, “Adjoining to Wythoff’s game its P-positions as moves”, Theoretical Computer Science, 205 (1998) 283-296. [PS]

Peer-Reviewed Conference Proceedings:

M. Ozery-Flato and R. Shamir, “Sorting cancer karyotypes by elementary operations”, In Proceedings of the 6th RECOMB Satellite Workshop on Comparative Genomics 2008, LNCS Vol. 5267 pp. 211–225 (2008) [PDF]
M. Ozery-Flato and R. Shamir, “On the frequency of genome rearrangement events in cancer karyotypes”, Presented in The First Annual RECOMB Satellite Workshop on Computational Cancer Biology (2007) [PDF]
M. Ozery-Flato and R. Shamir, “Rearrangements in genomes with centromeres - part I: translocations”, In Proceedings of the 11th Annual International Conference on Computational Molecular Biology (RECOMB 2007), LNCS Vol. 4453 pp. 339-353 (2007) [PDF]
M. Ozery-Flato and R. Shamir, “Sorting by translocations via reversals theory”, In Proceedings of the 4th RECOMB Satellite Workshop on Comparative Genomics 2006, LNCS Vol. 4205 pp. 87-98 (2006) [PDF]
M. Ozery-Flato and R. Shamir “An algorithm for sorting by reciprocal translocations”, In Proceedings of CPM 2006, LNCS Vol. 4009 pp. 258-269 (2006) [PDF]

Teaching Assistant:

Current:

Past: